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laptop with cell data on screen

Discover the mechanisms of human health

Download and visually explore data to understand the functionality of human tissues at the cellular level with Chan Zuckerberg CELL by GENE Discover (CZ CELLxGENE Discover).

unique cells




cell types


Code snippet showing cellxgene census import statement
T cell page in cell guide showing description of t cells and map of cell ontology
cellxgene datasets page showing list of datasets with sidebar that contains optional filters
cellxgene gene expression page showing table of genes and list of cell types and filters
pop-up modal for user to create a data directory for storing gene sets and annotations
pop-up modal for user to create a data directory for storing gene sets and annotations

Behind-the-scenes of Chan Zuckerberg CELLxGENE

Watch a behind-the-scenes look at CZ CELLxGENE and explore how the platform can help scientists quickly surface important information that could lead to discoveries in treating disease.

Chan Zuckerberg Initiative presents Mapping the Road to Health, a Freethink original video (external link)

The Tabula Sapiens: A multiple-organ, single-cell transcriptomic atlas of humans

03.04.22 - bioRxivDOI:
13.05.22 - ScienceDOI: 10.1126/science.abl4896
13.05.22 - CZ CELLxGENEThe Tabula Sapiens Consortium et al. (2021) bioRxiv

Cross-tissue immune cell analysis reveals tissue-specific features in humans

13.05.22 - ScienceDOI: 10.1126/science.abl5197
20.07.21 - bioRxivDOI:
13.05.22 - CZ CELLxGENEDomínguez Conde et al. (2022) Science

An integrated cell atlas of the human lung in health and disease

11.03.21 - bioRxivDOI:
13.05.22 - CZ CELLxGENESikkema et al. (2022) bioRxiv

Single-cell eQTL mapping identifies cell type–specific genetic control of autoimmune disease

08.04.22 - ScienceDOI: 10.1126/science.abf3041
13.05.22 - CZ CELLxGENEYazar et al. (2022) Science

Single-cell RNA-seq reveals cell type–specific molecular and genetic associations to lupus

08.04.22 - ScienceDOI: 10.1126/science.abf1970
13.05.22 - CZ CELLxGENEPerez et al. (2022) Science

Accelerating COVID-19 Research with New Single-Cell Technologies

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5 Ways Single-Cell Biology Is Advancing Our Understanding of Disease

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