- CellxGene
- Find Published Data
- Contribute and Publish Data
- Download Published Data
- Analyze Public Data
- Get Started
- Hosted Tutorials
- Gene Expression Documentation
- Annotate and Analyze Your Data
- Join the CellxGene User Community
- Cite cellxgene in your publications
- Frequently Asked Questions
- Learn About Single Cell Data Analysis
Downloading Published Data on CZ CELLxGENE Discover
Clicking the download button launches a dialog that enables a dataset to be downloaded in h5ad (AnnData v0.8) and rds (Seurat v5) formats. All datasets adhere to the CELLxGENE single cell annotated data schema.
Click the white Download button for the dataset that you wish to download.
Select either the h5ad (AnnData v0.8) or rds (Seurat v5) download format. Click the blue Download button to download the dataset via the browser. The permanent download link can also be copied, shared, and pasted into a browser address bar.